Tier1 and Tier-2 Weekly Report 2009-11-10
General News
- new MC AOD dataset distribution policy discussed within ADC and ICB so as to take into account operational constraints (among others) [20091110]
- 10 copies of latest datasets available across Grid
- as new dataset versions are available, numbers of custodial copies reduced to 2 (for version N-1) and 0 (for version N-2)
- when a site is > 80% full:
- select least used and old data
- mark and publish non-custodial data to be deleted
- delete 1 week later until site is < 60% full
- T2s are for user analysis but should be considered if:
- at least 100 TBs
- pass HammerCloud validation criteria for efficiency and throughput: 90% efficiency, 150M events per day throughput at the site
- should meet reliability criteria
- removing sites not meeting above criteria reduces overall space availability within ATLAS by approx. 10%
- ability will be there for clouds to decide within their respective federation in general what the endpoint locations will be
- CA Cloud Squad Actions [20091110]
- checksum mismatch for file at TRIUMF [20091009]
- missing EVNT datasets at sites but believed to be present in Panda - check DQ2 [20091024]
- checksum error on dataset files requiring re-replication [20091030] * SOLVED AND CLOSED IN SAVANNAH *
- checksum mismatch on dataset file(s) at Victoria [20091105]
- missing input files for tasks in CA cloud [20091108]
- Squid deployment [20091110]
- tested in SAM for ATLAS: https://lcg-sam.cern.ch:8443/sam/sam.py?sensors=CE®ions=CERN&vo=atlas&order=SiteName&funct=ShowSensorTests
, also within GangaRobot
- currently status as of this morning: all sites good (WARN is ok).
- ALBERTA-LCG2 WARN (local squid server offline until this AM)
- SFU-LCG2 WARN (for both CEs; Victoria squid is the backup but not online)
- TORONTO-LCG2 WARN (local squid not online; primary backup points to ALBERTA squid but fails due to network routing issue; secondary backup to SFU OK)
- TRIUMF-LCG2 WARN (for both CEs; local Frontier launchpad and BNL as backup)
- VICTORIA-LCG2 WARN (local squid not online; backup points to SFU squid)
- ReadReal test passes at all sites except SFU and TRIUMF which at the time of the problem the only sites labelled with dcache_std in the ToA
- PoolCondPFC file structure (problematic extra strings) issues for bugaboo CE and TRIUMF ce2 being followed-up with Asoka, Alessandro, Rod, D Q2 developers, etc. for the implementation of short-term and long-term needed fixes.
- central DDM Ops dataset deletion [20091110]
- approx. 25% of all tid datasets from spring mc08 re-reconstruction (r6*_t53) lost in DDM accident
- redoing reconstruction of samples to be performed only upon specific requests by groups
- https://savannah.cern.ch/bugs/index.php?58355
- announced vulnerability to sites via EGEE broadcast * please take indicated steps as soon as possible
-
- golden release of dCache announced: version 1.9.5 (see dCache user-forum announcement)
- recall previously announced end-of-life for dCache versions < 1.9.4 (also see dCache user-forum announcement)
- also remember the previously announced security updates to postgresql for releases packaged with SL3/4/5 (i386/x86_64) (link)
-
- (OLD) REMINDER #1: long reported SRM subsystem vulnerability in dCache [2009-07-27]
- see dcache user-forum archives or forwarded email from Reda
- all production versions affected and require advertised patches [2009-08-04]
- 1.9.1-11, 1.9.2-11, 1.9.3-3, 1.9.4-2
- For reference, here is the current installation status:
- SFU: all nodes at 1.9.2-8 and client 1.9.2-4
- Toronto: admin, chimera nodes at 1.9.0-8, srm/gip at 1.9.1-7, pools at 1.9.1-7
- WestGrid-Alberta: all nodes at 1.9.3-3
- TRIUMF: all nodes at 1.9.3-3, SRM headnode at 1.9.3-4 (bug fix).
- VICTORIA: 1.8.0.12p5
- ALBERTA: 1.8.0.12p6
- REMINDER #2: STEP09 Site Follow-up Homework [since 2009-07-14]
- REMINDER #3: SiteTests package should be installed by all site admins and exercised regularly (daily) to confirm site functions for ganga and pa thena
- REMINDER #4: site and LFC clean-up needed of files and (empty) directories associated with ccrc08 [2009-06-09]
SAM Results
OPS VO
ATLAS VO
APEL Accounting
APEL Publishing Status
APEL Accounting Results
Site Reports
Alberta
Recent Issues
- summary of this weeks Savannah bugs and GGUS tickets for site:
- production job issues
- 20091108
- dccp timeout errors - coincident with unscheduled downtime of site SE services
- analysis job issues
- 20091109
- dccp timeout errors - concident with end of unscheduled downtime of site SE services
- scheduled downtime for CA-ALBERTA-WESTGRID-T2 on 20091108 for several hours during computing centre power maintenance
- added unscheduled downtime to ALBERTA-LCG2 during same period as some dCache pools and Squid server are hosted on WestGrid
- services restored late in the evening of 20091108
- installation status: WLCG on WestGrid-Alberta cluster [20091110]
- site certification by CERN ROC started [20090921] https://gus.fzk.de/ws/ticket_info.php?ticket=51713
- some job submission errors found with no results returned; "cannot read job wrapper output" and "abort request expired" being investigated
- CERN ROC indicated these errors likely to their listing of the site in the GOCDB as 'candidate' instead of 'uncertified'.
- CERN ROC now [20091110] new 3 day period of SAM tests.
- need to modify dCache configuration to have multihomed pools to separate internal and external traffic; instructions kindly provided by Sergey
Outstanding Issues
- missing input EVNT files believed to be at site but not
- few minor issues pending correction on existing T2 facility:
- full decoupling of WLCG accounts from cluster NIS to be done (see problem reported 2009-04-14)
- pnfsd.log to be added to log-rotate [2009-03-31]
- few WNs to be debugged with respect to missing stderr/stdout
- still need to add 2nd Gigabit Ethernet nic to dCache pools for internal network access from WNs to avoid NAT
Recent Issues
- summary of this weeks Savannah bugs and GGUS tickets for site:
- apel publishing results for September and October 2009 [20091110]
- low values published but not expected when comparing with ATLAS production dashboard for the same period
- GlueHostBenchmarkSF00 set to zero for both clusters in site BDII - fixed by site
- scheduled downtime booked for 20091112 until 20091114
- SL5 (bugaboo) queue marked in 'test' within Panda pending follow-up post scheduled downtime
- additional separate analysis queue (ANALY_SFU_bugaboo) requested of Panda team and created
Outstanding Issues
- bugaboo (SL5) commissioning within atlas
- SFU storage access protocol sanity check [20091022]
- missing dcap - Status of this?
- snowpatch - fairshare status wrt different pilots not running [20090918]
- all are members of the overall atlas group - sub-group fairshare (?)
- NOTE: updated fairshare values to be implemented pending info to arrive from Bryan based upon NRAC allocations for ATLAS [20091103]
- apel publishing [20090825]
- apel publishing information missing for October (see above plots) [20091013]
- publishing status for dteam appears empty since mid-July and coincides with appearance of the atcan group in the status graphs (see above)
- confirmed to coincide with change in VOMS group and role for direct tests by Sergey
- low-priority follow-up needed given that dteam jobs are observed regularly and consistently at other sites (Alberta for example)
- recurrent problems only seen at SFU SE:
- discrepancy between SRM and DQ2 views of MCDISK occupancy (observed during STEP09)
- list of files expected to exist at SFU SE extracted from dump of TRIUMF LFC
- list of files expected to exist at SFU SE but not found in pnfs: lost_atlasmcdisk_pnfs.files
- Sergey creating list of files that exist in pnfs but are not on any pools
- Sergey additionally creating list of files that exist in pnfs but are not on any pools
Victoria
Recent Issues
- summary of this weeks Savannah bugs and GGUS tickets for site:
- site MCDISK area temporarily increased in size to accomodate a single small UAT dataset [20091027]
- dataset transfer of UAT DS101-medcut requested of DDM Ops
- slow rate of transfer observed (10 MBps) with one parallel transfer and 1 stream configured within FTS
- increased to 3 parallel files and 3 streams each, with improved throughput and no SE problems observed [20091101]
Outstanding Issues
Toronto
Recent Issues
- summary of this weeks Savannah bugs and GGUS tickets for site:
- CA-SCINET-T2 installation:
- new site certification by CERN ROC: https://gus.fzk.de/ws/ticket_info.php?ticket=49823
- dCache 1.9.4 now on pools but finding some configuration issues
- dCache admin node being updated to CentOS 53
- DDN firmware update debugging from vendor during downtime
- designated node for squid cache installation
Outstanding Issues
- cleanup of suspended transfers from 20091031 still pending on SE
- Squid/Frontier access tests via ReadReal [20091028]
- strange network path issue seen when attempting to reach Alberta squid server, attempting to reach via LightPath but fails
- added secondary backup of SFU squid into ToA
- Still have two (previously) open GGUS tickets to resolve GIP information for the dCache 1.9
installation that require follow-up.
Recent Issues
- summary of this weeks Savannah bugs and GGUS tickets for site:
- ce3 (SL5) commissioning within atlas
Outstanding Issues
McGill
Recent Issues
Outstanding Issues
- attempts to restore the McGill site to up-and-running state have resumed [2009-03-25]
- pilots (without payload) successfully running
- next target is successful SAM tests
- SE functionality still to be tested on current dCache instance with two pools
Production
Summary
DashboardSummary.pdf
Failed Jobs
From Panda Monitor:
FailedJobs.pdf
From Dashboard:
You can find the meanings of the transform error codes on
this link.
TRIUMF:
name,rank,value
TRFERROR,1,157
TRF_SEGFAULT ,2,89
TRF_UNKNOWN ,3,73
EXEPANDA_JOBDISPATCHER_NOREPLYTOSENTJOB,4,62
EXEPANDA_DQ2GET_FILE-SIZE-EXCEEDS-LIMIT,5,50
EXEPANDA_JOBKILL_SIGTERM,6,32
EXEPANDA_DQ2PUT_FILECOPYERROR,7,30
EXEPANDA_JOBDISPATCHER_HEARTBEAT,8,17
EXEPANDA_JOBKILL_BYPILOT,9,12
Alberta:
name,rank,value
EXEPANDA_DQ2GET_INFILE,1,52
TRF_UNKNOWN ,2,51
EXEPANDA_JOBDISPATCHER_NOREPLYTOSENTJOB,3,41
TRFERROR,4,39
TRF_SEGFAULT ,5,30
EXEPANDA_GET_REPLICANOTFOUND,6,18
EXEPANDA_JOBDISPATCHER_HEARTBEAT,7,8
EXEPANDA_JOBKILL_BYPILOT,8,1
SFU:
name,rank,value
TRFERROR,1,61
EXEPANDA_JOBDISPATCHER_HEARTBEAT,2,55
TRF_UNKNOWN ,3,27
TRF_SEGFAULT ,4,20
EXEPANDA_JOBDISPATCHER_NOREPLYTOSENTJOB,5,9
EXEPANDA_JOBKILL_BYPILOT,6,4
EXEPANDA_DQ2PUT_FILECOPYERROR,7,2
EXEPANDA_JOBKILL_SIGTERM,8,1
TRF_SVRINIT ,9,1
TRF_OUTFILE ,10,1
EXEPANDA_DQ2GET_FILE-SIZE-EXCEEDS-LIMIT,11,1
Toronto:
name,rank,value
TRF_SEGFAULT ,1,22
TRF_UNKNOWN ,2,20
EXEPANDA_JOBDISPATCHER_HEARTBEAT,3,19
TRFERROR,4,18
EXEPANDA_JOBDISPATCHER_NOREPLYTOSENTJOB,5,10
EXEPANDA_DQ2GET_FILE-SIZE-EXCEEDS-LIMIT,6,10
EXEPANDA_JOBKILL_BYPILOT,7,2
Victoria:
name,rank,value
TRFERROR,1,61
EXEPANDA_JOBDISPATCHER_HEARTBEAT,2,29
EXEPANDA_GET_REPLICANOTFOUND,3,28
TRF_UNKNOWN ,4,23
TRF_SEGFAULT ,5,21
EXEPANDA_JOBDISPATCHER_NOREPLYTOSENTJOB,6,16
EXEPANDA_DQ2_STAGEIN,7,14
EXEPANDA_DQ2PUT_FILECOPYERROR,8,13
EXEPANDA_JOBKILL_BYPILOT,9,1
EXEPANDA_DQ2GET_INFILE,10,1
EXEPANDA_PUT_GLOBUSSYSTEMERROR,11,1
Notes
- How we fared to other ATLAS sites ...
| cloud |
success |
failure |
success (walltime) |
failure (walltime) |
efficiency |
efficiency (walltime) |
BNL |
171173 |
12111 |
2795269316 |
96372163 |
93.4% |
96.7% |
FZK |
148578 |
5808 |
3475097925 |
73761294 |
96.2% |
97.9% |
None |
114737 |
9256 |
2589255896 |
131146066 |
92.5% |
95.2% |
LYON |
87966 |
5194 |
1935370827 |
91338527 |
94.4% |
95.5% |
RAL |
62377 |
6268 |
2049156016 |
104414311 |
90.9% |
95.2% |
NDGF |
56495 |
6168 |
1607111533 |
182143494 |
90.2% |
89.8% |
SARA |
39329 |
9762 |
804435343 |
102644696 |
80.1% |
88.7% |
CNAF |
22664 |
1932 |
870631816 |
30036354 |
92.1% |
96.7% |
TRIUMF |
12449 |
1253 |
381368143 |
20934434 |
90.9% |
94.8% |
PIC |
6432 |
1714 |
179095553 |
40182148 |
79% |
81.7% |
CERN |
2079 |
1874 |
47312918 |
35806060 |
52.6% |
56.9% |
ASGC |
434 |
266 |
8659365 |
2024252 |
62% |
81.1% |
| total |
724713 |
61606 |
1.6742764651e+10 |
910803799 |
92.2% |
94.8% |
- Yuri's notes:
- - active tasks from PandaDB: 113
- -- by cloud: CA:8 DE:7 ES:9 FR:15 IT:6 ND:9 NL:10 TW:9 UK:27 US:13
- Thu Nov.5.
- + CA/VICTORIA PRODDISK FT f./REQUEST_TIMEOUT.GGUS 53003 solved:dCache server/pools restarted.No errors in past 12 hours.
- Fri Nov.6.
- + CA/SFU job f./lfc_getreplicas f./could not load a sec.plugin.GGUS 53045 in progress:a new pilot factory issue.Reverted to the old one and developer notified.Works again.
- Mon Nov.9.
- + CA/ALBERTA 64 job f./DBrel. dccp timeout.GGUS 53097 in progress: UD, 4 of 12 dCache pools were unavailable,now dccp on the file works.
- Notes:
- TRIUMF drained queues (8-9 Nov)
- SFU bugaboo: new pilot factory problem (6 Nov). Still using old factory for this CE.
- SFU bugaboo - missing releases 15.3.1.7 and 15.3.1.8 (fixed)
- jobs still going to T2 where data is not there.
--
BryanCaron - 03 Nov 2009